a free software for qPCR 2012-01-13T17:09:00+00:00 urn:md5:fcb96d1f180b82310bf7fa48a6f9224d Pluxml urn:md5:84977906ed054a83c8b7cd4392286caa 2012-01-13T17:09:00+00:00 tgastine Release <p> I've uploaded today a dmg of pyQPCR 0.9 for Mac OS X users. </p> <h2>Checksums</h2> <h3>pyQPCR-0.9.dmg</h3> <ul> <li><b>Md5sum </b>0806fdbff601f0407ef774e837520043</li> <li><b>sha1sum </b>35bf63d7277df836029f65e353900aeff4c0a32c</li> </ul> urn:md5:90a1175293224be249229eacd24ab180 2012-01-03T19:44:00+00:00 tgastine Release <h2>Release notes</h2> <p> The 0.9 version of pyQPCR is out. </p> </p> <p align=center> <a class="group" rel="group" href="data/images/snapshot.png" title="pyQPCR"><img src="data/images/snapshot.png.tb" alt="pyQPCR" /></a> </p> <p> It brings some new features and bugfixes: </p> <h3>New features</h3> <ul> <li><b>Assistant</b>: Add an assistant wizard that apply a plate setup to a new plate (name of the genes, type of the well, and so on). It works from both an internal plate or an external plate.</li> <li><b>Print plate setup</b>: Add an option to print the plate setup in the PDF output.</li> <li><b>New PCR device</b>: ESCO spectrum 48 and Illumina Eco are now supported.</li> </ul> <h3>Bugfixes</h3> <ul> <li>bugfix for AB7000 (sds version 1.1).</li> <li>bugfix in the absolute quantification computation (standard error were wrong).</li> </ul> <p>Don't hesitate to ask for new features or for bug corrections.</p> <h2>Checksums</h2> <h3>pyqpcr-0.9.tar.gz</h3> <ul> <li><b>Md5sum </b> 21bd66bdbe494ea8b1c15fc5cb51e4e2 </li> <li><b>sha1sum </b> 7ca8eda32dae06a016294546b432e08047dcb520 </li> </ul> <h3>pyqpcr-0.9-setup.exe</h3> <ul> <li><b>Md5sum </b> a7b977bc39f16343af95cb68b766429d </li> <li><b>sha1sum </b> ed177c0842d75a961bf1337565999e804048d620 </li> </ul> <h2>Notes</h2> Unfortunately, I don't have any access to a Mac at the moment. Therefore, it is impossible to build the dmg file of the 0.9 version. I hope to find a solution soon, but any help is welcome! Any apple device with Mac OS X 10.4 or 10.5 (to ensure backward compatibility) and a kind guy with some experience using Macports would be perfect :-) . urn:md5:9ff31f852636caeae1286ff1a684a0a4 2011-11-30T18:46:00+00:00 tgastine News Just a small video to present a new feature that will be added in the upcoming 0.9 release of pyQPCR: a small wizard that helps to compute dilutions automatically. <p align=center> <iframe src="http://player.vimeo.com/video/32737177?title=0&amp;byline=0&amp;portrait=0" width="400" height="300" frameborder="0" webkitAllowFullScreen mozallowfullscreen allowFullScreen></iframe> </p> urn:md5:aea159aa51aca896a94f747a865b93d9 2011-04-12T19:51:00+00:00 tgastine Release <h2>Release notes</h2> <p> The 0.8 version of pyQPCR is out. </p> <p> It brings some new features and bugfixes: </p> <h3>New features</h3> <ul> <li><b>Save order</b>: the XML files now saves the order of the targets and samples, so if the user changes the ranking, the settings are saved.</li> <li><b>Automatic dilution wizard</b>: a new dialog has been added to compute the dilutions automatically.</li> <li><b>New PCR device</b>: Biorad C1000 is now supported.</li> </ul> <h3>Bugfixes</h3> <ul> <li>All the parsing subroutines for Applied devices have been merged into a single one.</li> <li>Bugfix in the printing dialog.</li> </ul> <p>Don't hesitate to ask for new features or for bug corrections.</p> <h2>Checksums</h2> <h3>pyqpcr-0.8.tar.gz</h3> <ul> <li><b>Md5sum </b> 0ed575a912022aadea14b96d38894f5a </li> <li><b>sha1sum </b> a9debf54d6577511888f03d1cd5840ff2293f2be</li> </ul> <h3>pyqpcr-0.8-setup.exe</h3> <ul> <li><b>Md5sum </b> f14aca964c9956a91a54ca3a8f7aab91 </li> <li><b>sha1sum </b> e53e28894c358d76d6aabc7b6baf907e549ca1eb</li> </ul> <h3>pyqpcr-0.8.dmg</h3> <ul> <li><b>Md5sum </b> 3135e6d6b948d14a7ffa1181ecd970e9</li> <li><b>sha1sum </b>c699ac06b1103dfc5a1364d7526fe8fa4dd34eb9</li> urn:md5:700a8ec5ae060871e97f7d65fabf08b2 2010-10-26T18:47:00+00:00 tgastine Release <h2>Release notes</h2> <p> The 0.7 version of pyQPCR is out. </p> <p align=center> <a class="group" rel="group" href="data/images/color1.png" title="pyQPCR"><img src="data/images/color1.png.tb" alt="pyQPCR" /></a> </p> <p> It brings some new features and bugfixes: </p> <h3>New features</h3> <ul> <li><b>Save color</b>: the XML files now saves the color of the targets and samples, so if the user changes these values, the settings are saved.</li> <li><b>New PCR devices</b>: several PCR devices have been added: Qiagen Corbett (72-rotor and 100-rotor), Applied Biosystem 7700 and 7900, Cepheid SmartCycler and Stratagen Mx3000.</li> </ul> <h3>Bugfixes</h3> <ul> <li>Undo/Redo behaviour has been largely improved and polished.</li> <li>Bugfixing on the Edit Well Dialog.</li> <li>Rewrite the color attibution of targets and samples.</li> <li>Implementation of __cmp__ methods that help to improve the undo/redo mechanism</li> </ul> <p>Don't hesitate to ask for new features or for bug corrections.</p> <h2>Checksums</h2> <h3>pyqpcr-0.7.tar.gz</h3> <ul> <li><b>Md5sum </b> b8f45d28afbaca9110a84fa8414e08d2 </li> <li><b>sha1sum </b> 05922762a4bc5e38d870b68320a1cf5862a919d2</li> </ul> <h3>pyqpcr-0.7-setup.exe</h3> <ul> <li><b>Md5sum </b> a02cf578cbfaee36deec433e05312be1 </li> <li><b>sha1sum </b> 4eb21dec6e98660ceb6c7ce27228c13156adfed9</li> </ul> <h3>pyqpcr-0.7.dmg</h3> <ul> <li><b>Md5sum </b> b209b8b6bdca9e507603396f6460c798</li> <li><b>sha1sum </b>c76c4898acba06fb4f0a6a932fd425ddff197b3a</li> urn:md5:4171d9a8a83d3572d0606fd61da14f29 2010-08-28T17:11:00+00:00 tgastine Release <h2>Release notes</h2> <p> The 0.6 version of pyQPCR is out. </p> <p align=center> <a class="group" rel="group" href="data/images/std1.png" title="pyQPCR"><img src="data/images/std1.png.tb" alt="pyQPCR" /></a> </p> <p> It brings some new features and bugfixes: </p> <h3>New features</h3> <ul> <li><b>Subplate extractor</b>: it is now possible to extract a sublate from your plate. Just select the wells you want to extract, and click on the subplate extractor, it creates a new plate with your selected wells.</li> <li><b>Absolute quantification</b>: pyQPCR can now also compute absolute quantification (just switch your type of calculation in Settings).</li> <li><b>Support of 384-wells plate</b>: it is now possible to import this kind of plate in pyQPCR.</li> <li><b>New PCR devices</b>: Biorad MyIQ (2 and 5) are supported. As these devices export data only in XLS format, the user as to convert it to a CSV file with OpenOffice or Excel. As usual, new devices can be added on request.</li> </ul> <h3>Bugfixes</h3> <ul> <li>The import of CSV files (for any kind of PCR device) does not depend anymore on the type of CSV files (separated by comma or semicolon).</li> <li>No more problem with the path and accentuated fonts on Windows (unicode filenames).</li> <li>No more crash with the color chooser on windows (the .exe is now python 2.6 based).</li> <li>Displays correctly large (and small) amounts in a scientific notation instead of classical one.</li> </ul> Moreover, a documentation done with the Spinx software (<a href="http://spinx.pocoo.org">http://sphinx.pocoo.org/</a>) is underway. Hopefully, I will release it with the next version of pyQPCR. <p>Don't hesitate to ask for new features or for bug corrections.</p> <h2>Checksums</h2> <h3>pyqpcr-0.6.tar.gz</h3> <ul> <li><b>Md5sum </b> 51f6a8eec703962055bc128cf99822da </li> <li><b>sha1sum </b> 7099b5f51d17583cbb05eae3d4d4ca1fd8d14f0d</li> </ul> <h3>pyqpcr-0.6-setup.exe</h3> <ul> <li><b>Md5sum </b> 6e0b3f6dfb373fd2fe70ff90c900f930 </li> <li><b>sha1sum </b> 642dfa0d91afd8d87ee62fb2cf4dac35996e7d04</li> </ul> <h3>pyqpcr-0.6.dmg</h3> <ul> <li><b>Md5sum </b> ab4f3e0aa15acb0e172111c9f397a261 </li> <li><b>sha1sum </b>fce1a7a630fffcd2fc0d92da6a92482971ef2666</li> </ul> urn:md5:f31ec2a72101f90ffcaa0560e8af9349 2010-06-19T18:27:00+00:00 tgastine News I've added a video as a tutorial for pyQPCR : <p align=center> <iframe src="http://player.vimeo.com/video/12695306?title=0&amp;byline=0&amp;portrait=0" width="400" height="268" frameborder="0" webkitAllowFullScreen mozallowfullscreen allowFullScreen></iframe> </p> urn:md5:3ce5807765f1215257f89fd8d847fc16 2010-06-09T13:37:00+00:00 tgastine Release <h2>Release notes</h2> <p> The 0.5.1 version of pyQPCR is out. It brings some new features : </p> <ul> <li>New file format for AB7500 has been added.</li> <li>Better copy of the result table.</li> </ul> Don't hesitate to ask for new features or for bug corrections. Any suggestion is welcome to improve this program. New PCR devices are going to be supported soon. <h2>Checksums</h2> <h3>pyqpcr-0.5.1.tar.gz</h3> <ul> <li><b>Md5sum </b> 033eac781697aada4e92d03501671959 </li> <li><b>sha1sum </b>9babccaf686106d637b65b53164568305fddcc3c</li> </ul> <h3>pyqpcr-0.5.1-setup.exe</h3> <ul> <li><b>Md5sum </b> 5816ed907d0f62f77d9aa4227ca6e232 </li> <li><b>sha1sum </b>87b6c5f21500d41f35c6b3339adb7214e75ccd76</li> </ul> <h3>pyqpcr-0.5.1.dmg</h3> <ul> <li><b>Md5sum </b> d031408636cc1f61248425a1eaa14d2d </li> <li><b>sha1sum </b>bc01607ab57cb898bba67a5e141d6e886d3d54fe</li> </ul>